Jump to ContentJump to Main Navigation

Online

99,00 € / $149.00*

* Prices subject to change. Shipping costs will be added if applicable.
Publication Date:
November 2010
ISSN:
1544-6115
DOI:
10.2202/1544-6115.1617

See all formats and pricing

Online
Individual Subscription Online only
Euro [D] 99.00
RRP for USA, Canada, Mexico
US$ 149.00 *
Print
Individual Subscription Online only
Euro [D] 285.00
RRP for USA, Canada, Mexico
US$ 384.00 *
Print + Online
Individual Subscription Online only
Euro [D] 342.00
RRP for USA, Canada, Mexico
US$ 461.00 *
*Prices subject to change. Shipping costs will be added if applicable.

Editor-in-Chief: Stumpf, Michael P.H.

Editorial Board Member: Beaumont, Mark / Binder, Harald / Gupta, Mayetri / Hubbard, Alan E. / Husmeier, Dirk / Ji, Hongkai / Keles, Sunduz / Kerr, Kathleen / Lazzeroni, Laura / Lin, Shili / Ma, Ping / Marjoram, Paul / Mertens, Bart / Nerman, Olle / G. Petretto, Enrico / Plagnol, Vincent / Purdom, Elizabeth / Robin, Stéphane / Rzhetsky, Andrey / Sanguinetti, Guido / van der Laan, Mark J. / von Haeseler, Arndt / Weeks, Daniel E. / Wiuf, Carsten / Zhao, Hongyu

6 Issues per year

IMPACT FACTOR 2011: 1.517
5-year IMPACT FACTOR: 1.704
Rank 27 out of 116 in category Statistics & Probability in the 2011 Thomson Reuters Journal Citation Report/Science Edition

Predicting Patient Survival from Longitudinal Gene Expression

Yuping Zhang / Robert J. Tibshirani / Ronald W. Davis

1Stanford University

1Stanford University

1Stanford University

Citation Information: Statistical Applications in Genetics and Molecular Biology. Volume 9, Issue 1, Pages –, ISSN (Online) 1544-6115, DOI: 10.2202/1544-6115.1617, November 2010

Publication History:
Published Online:
2010-11-22

Characterizing dynamic gene expression pattern and predicting patient outcome is now significant and will be of more interest in the future with large scale clinical investigation of microarrays. However, there is currently no method that has been developed for prediction of patient outcome using longitudinal gene expression, where gene expression of patients is being monitored across time. Here, we propose a novel prediction approach for patient survival time that makes use of time course structure of gene expression. This method is applied to a burn study. The genes involved in the final predictors are enriched in the inflammatory response and immune system related pathways. Moreover, our method is consistently better than prediction methods using individual time point gene expression or simply pooling gene expression from each time point.

Keywords: prediction; time course; gene expression; survival

Comments (0)

Please log in or register to comment.