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Publication Date:
June 2007
ISSN:
1437-4331
DOI:
10.1515/CCLM.2007.177

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Clinical Chemistry and Laboratory Medicine (CCLM)

Published in Association with the International Federation of Clinical Chemistry and Laboratory Medicine and the European Federation of Clinical Chemistry and Laboratory Medicine

Editor-in-Chief: Plebani, Mario

Editorial Board Member: Lippi, Giuseppe / Gillery, Philippe / Kazmierczak, Steven / Lackner, Karl J. / Melichar, Bohuslav / Siest, Gérard / Whitfield, John B. / Abi Fadel, Marianne / Alvarez Menendez, Francisco V. / Azzazy, Hassan M.E. / Diamandis, Eleftherios P. / Eckardstein, Arnold / Favaloro, Emmanuel J. / Griesmacher, Andrea / Herrmann, Wolfgang / Hoffmann, Johannes J.M.L. / Hooijkaas, Herbert / Ichihara, Kiyoshi / Kaabachi, Naziha / Kim, Jeong-Ho / Korte, Wolfgang / Kroupis, Christos / Lai, Leslie Charles / Lam, Wai Kei Christopher / Marc, Janja / Miyoshi, Eiji / Özben, Tomris / Palicka, Vladimir / Panteghini, Mauro / Queralto, Jose M. / Scartezini, Marileia / Simundic, Ana-Maria / Tsongalis, Gregory J. / Wallemacq, Pierre E. / Yan, Shengkai / Young, Ian S. / Chiu, Rossa Wai Kwun / Ghosh, Debabrata / Kappelmayer, Janos / Lehmann, Sylvain / Sypniewska, Grazyna

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Increased IMPACT FACTOR 2011: 2.150
Rank 10 out of 32 in category Medical Laboratory Technology in the 2011 Thomson Reuters Journal Citation Report/Science Edition

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Reduction of multi-dimensional laboratory data to a two-dimensional plot: a novel technique for the identification of laboratory error

Steven C. Kazmierczak1 / Todd K. Leen2 / Deniz Erdogmus3 / Miguel A. Carreira-Perpinan4

1Department of Pathology, Oregon Health & Science University, Portland, OR, USA

2Department of Computer Science and Engineering, OGI School of Science and Engineering, Portland, OR, USA

3Department of Computer Science and Engineering, OGI School of Science and Engineering, Portland, OR, USA

4Department of Computer Science and Engineering, OGI School of Science and Engineering, Portland, OR, USA

Corresponding author: Dr. Steven Kazmierczak, Department of Pathology, Oregon Health & Science University, Mailcode L-471, Portland, OR 97239, USA Phone: +1-503-494-4208, Fax: +1-503-494-8148,

Citation Information: Clinical Chemical Laboratory Medicine. Volume 45, Issue 6, Pages 749–752, ISSN (Online) 14374331, ISSN (Print) 14346621, DOI: 10.1515/CCLM.2007.177, June 2007

Publication History:
Published Online:
2007-06-19

Abstract

Background: The clinical laboratory generates large amounts of patient-specific data. Detection of errors that arise during pre-analytical, analytical, and post-analytical processes is difficult. We performed a pilot study, utilizing a multidimensional data reduction technique, to assess the utility of this method for identifying errors in laboratory data.

Methods: We evaluated 13,670 individual patient records collected over a 2-month period from hospital inpatients and outpatients. We utilized those patient records that contained a complete set of 14 different biochemical analytes. We used two-dimensional generative topographic mapping to project the 14-dimensional record to a two-dimensional space.

Results and conclusions: The use of a two-dimensional generative topographic mapping technique to plot multi-analyte patient data as a two-dimensional graph allows for the rapid identification of potentially anomalous data. Although we performed a retrospective analysis, this technique has the benefit of being able to assess laboratory-generated data in real time, allowing for the rapid identification and correction of anomalous data before they are released to the physician. In addition, serial laboratory multi-analyte data for an individual patient can also be plotted as a two-dimensional plot. This tool might also be useful for assessing patient wellbeing and prognosis.

Clin Chem Lab Med 2007;45:749–52.

Keywords: data reduction techniques; error detection; laboratory error; serial data analysis

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