Abstract
Twenty-four Alternaria strains have been isolated from wood samples in Korea and submitted to phylogenetic analyses. The gene trees generated from the ITS and histone gene region sequences revealed that, among the genus Alternaria, two species, Alternaria alternata sensu lato (s.l.) and Alternaria tenuissima, are involved in wood discoloration. In addition, the histone gene was useful as a marker for differentiating between A. alternata s.l. and A. tenuissima.
This study was supported by the Basic Science Research Program through the National Research Foundation of Korea funded by the Ministry of Education (NRF-2013R1A1A2A10011390) and by the Technology Development Program (309016-05) for Agriculture and Forestry, Ministry for Food, Agriculture, Forestry, and Fisheries, Republic of Korea.
References
Andersen, B., Frisvad, J.C., Søndergaard, I., Rasmussen, I.S., Larsen, L.S. (2011) Associations between fungal species and water-damaged building materials. Appl. Environ. Microbiol. 77:4180–4188.Search in Google Scholar
Andrew, M., Peever, T.L., Pryor, B.M. (2009) An expanded multilocus phylogeny does not resolve morphological species within the small-spored Alternaria species complex. Mycologia 101:95–109.10.3852/08-135Search in Google Scholar PubMed
Cho, H.S., Kim, B.R, Yu, S.H. (2001) Taxonomic studies on Alternaria in Korea (1). Mycobiology 29:27–42.10.1080/12298093.2001.12015757Search in Google Scholar
Gardes, M., Bruns, T.D. (1993) ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol. Ecol. 2:113–118.Search in Google Scholar
Glass, N.L., Donaldson, G.C. (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl. Environ. Microbiol. 61:1323–1330.Search in Google Scholar
Huh, N., Jang, Y., Lee, J., Kim, G.-H., Kim, J.-J. (2011) Phylogenetic analysis of major molds inhabiting woods and their discoloration characteristics. Part 1. Genus Trichoderma. Holzforschung 65:257–263.10.1515/hf.2011.018Search in Google Scholar
Jang, Y., Huh, N., Lee, J., Lee, J.S., Kim, G.-H., Kim, J.-J. (2011) Phylogenetic analysis of major molds inhabiting woods and their discoloration characteristics. Part 2. Genus Penicillium. Holzforschung 65:265–270.10.1515/hf.2011.019Search in Google Scholar
Kang, J.-C., Crous, P.W., Mchau, G.R.A., Serdani, M., Song, S.-M. (2002) Phylogenetic analysis of Alternaria spp. associated with apple core rot and citrus black rot in South Africa. Mycol. Res. 106:1151–1162.Search in Google Scholar
Kim, J.-J., Lee, S.-S., Ra, J.-B., Lee, H., Huh, N., Kim, G.-H. (2011) Fungi associated with bamboo and their decay capabilities. Holzforschung 65:271–275.10.1515/hf.2011.004Search in Google Scholar
Lee, Y.M., Jang, Y., Kim, G.-H., Kim, J.-J. (2012) Phylogenetic analysis and discoloration characteristics of major molds inhabiting woods. Part 3. Genus Cladosporium. Holzforschung 66:537–541.10.1515/hf.2011.184Search in Google Scholar
Lee, Y.M., Hong, J.-H., Lee, H., Ahn, B.J., Kim, G.-H., Kim, J.-J. (2013) Phylogenetic analysis of the genus Fusarium and their antifungal activity against wood-decay and sapstain fungi. Holzforschung 67:473–478.10.1515/hf-2012-0124Search in Google Scholar
Park, M.S., Romanoski, C.E., Pryor, B.M. (2008) A re-examination of the phylogenetic relationship between the causal agents of carrot black rot, Alternaria radicina and A. carotiincultae. Mycologia 100:511–527.10.3852/07-186R1Search in Google Scholar PubMed
Roberts, R.G., Reymond, S.T., Andersen, B. (2000) RAPD fragment pattern analysis and morphological segregation of small-spored Alternaria species and species group. Mycol. Res. 104:151–160.Search in Google Scholar
Seifert, K.A. (1999) Sapstain of commercial lumber by species of Ophiostoma and Ceratocystis. Ceratocystis and Ophiostoma. In: Taxonomy, Ecology, and Pathogenicity, 2nd. ed. Eds. Wingfield, M.J., Seifert, K.A., Webber, J.F. Am. Phytopath. Soc. Press, Minnesota. pp. 141–151.Search in Google Scholar
Vukojević, J., Grbić, M.L. (2010) Moulds on paintings in Serbian fine art museums. Afr. J. Microbiol. Res. 4:1453–1456.Search in Google Scholar
White, T.J., Bruns, T., Lee, S., Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: a guide to methods and applications. Eds. Innis, M.A., Gelfand, D.H., Shinsky, J.J., White, T.J. Academic Press, San Diego, CA. pp. 315–322.10.1016/B978-0-12-372180-8.50042-1Search in Google Scholar
Yang, D.-Q. (2005) Isolation of wood-inhabiting fungi from Canadian hardwood logs. Can. J. Microbiol. 51:1–6.Search in Google Scholar
Zhao, G.-Z. (2003) Taxonomic studies on 20 dictyosporic Hyphomycete genera from China and molecular systematics of represented species of 5 allied genera. Ph.D. thesis, Shandong Agricultural University.Search in Google Scholar
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