Peptidomics

ISSN: 2084-7203

First published: October 3, 2014

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Peptidomics is the very first journal devoted to the peptidome, i.e., the low molecular mass window of the proteome, which is still largely missed in proteomics studies. This subset of the proteome, representing essential gene products in all organisms from the most primitive to the most evolved, carries important biological information and deserves much more attention than it has received before. Peptidomics technologies involve state-of-the-art mass spectrometry systems, as well as continuously evolving dedicated bioinformatics and molecular biology approaches. Together with optimized analytical or synthetic methods, including (multidimensional) chromatography and orthogonal separations, or combinatorial synthesis, the modern-day ‘life scientist’ disposes of an ever expanding peptide chemical toolbox to study virtually every biological process using an innovative large-scale or systems approach

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Volume 3 Issue 1

February 2017

Bioinformatic resources for the investigation of proteins and proteomes

Angelo Facchiano February 10, 2017

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Abstract

Experimental techniques in omics sciences need strong support of bioinformatics tools for the data management, analysis and interpretation. Scientific community develops continuously new databases and tools. They make it possible the comparison of new experimental data with the existing ones, to gain new knowledge. Bioinformatics assists proteomics scientists for protein identification from experimental data, management of the huge data produced, investigation of molecular mechanisms of protein functions, their roles in biochemical pathways, and functional interpretation of biological processes. This article introduces the main bioinformatics resources for investigation in the protein world, with references to analyses performed by means of free tools available on the net.

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Editorial

Journal Editor
Pasquale Ferranti, University of Naples “Federico II”, Italy

Associate Editors
Christian W. Gruber, Medical University of Vienna, Austria
Andrea Urbani, University of Rome “Tor Vergata”, Italy

Editorial Advisory Board
Günter Allmaier, Technical University of Vienna, Austria
Per Andrén, Uppsala Universitet, Sweden
Mimoun Ayoub, Peptisyntha, Switzerland
Massimo Castagnola, Facoltà di Medicina – Università Cattolica, Italy
Michelle Colgrave, CSIRO Livestock Industries, Australia
Lieve Dillen, Johnson&Johnson, Belgium
Maria Dolores del Castillo, Institute of Food Science Research (CIAL) (CSIC/UAM), Spain
Georges Gaudriault, MedinCell, France
Ulf Göransson, Uppsala University, Sweden
Elvira Maria Hebert, Centro de Referencia para Lactobacilos (CERELA) - CONICET, Argentina
Djuro Josic, Brown University, USA
Oleg Krokhin, University of Manitoba, Canada
Sylvain Lehmann,CHU de Montpellier, Institut de Recherches en Biothérapie (IRB) Biochimie - Protéomique Clinique, France
Gianfranco Mamone, Istituto di Scienze dell' Alimentazione - CNR, Italy
Jason Mulvenna, Queensland Institute of Medical Research, Australia
Gianluca Picariello, Istituto di Scienze dell'Alimentazione – CNR, Italy
Paola Roncada, Istituto Sperimentale “Lazzaro Spallanzani”, Italy
Peter Schulz-Knappe, Protagen AG, Germany
Martina Schnölzer, German Cancer Research Center, Germany
Christopher Shaw, Queen's University Belfast, Ireland
Hans-Dieter Zucht, Proteome Sciences R&D GmbH & Co KG, Germany

Assistant Editors
Johannes Koehbach, Medical University of Vienna, Austria
Chiara Nitride, University of Naples “Federico II”, Italia

Language Editors
Garret Rochford, Dublin Institute of Technology, Ireland
Julia Richards, University of Pennsylvania, USA

Publisher
DE GRUYTER Poland
Bogumiła Zuga 32A Str.
01-811 Warsaw, Poland
T: +48 22 701 50 15

Editorial Contact
Agnieszka Topolska
Editorial Coordinator, Physics
Agnieszka.Topolska@degruyter.com

Peptidomics

Abstract

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