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Journal of Integrative Bioinformatics

Editor-in-Chief: Schreiber, Falk / Hofestädt, Ralf

Managing Editor: Sommer, Björn

Ed. by Baumbach, Jan / Chen, Ming / Orlov, Yuriy / Allmer, Jens

Editorial Board: Giorgetti, Alejandro / Harrison, Andrew / Kochetov, Aleksey / Krüger, Jens / Ma, Qi / Matsuno, Hiroshi / Mitra, Chanchal K. / Pauling, Josch K. / Rawlings, Chris / Fdez-Riverola, Florentino / Romano, Paolo / Röttger, Richard / Shoshi, Alban / Soares, Siomar de Castro / Taubert, Jan / Tauch, Andreas / Yousef, Malik / Weise, Stephan

4 Issues per year


CiteScore 2016: 0.93

SCImago Journal Rank (SJR) 2016: 0.416

Open Access
Online
ISSN
1613-4516
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Volume 10, Issue 3

Issues

An Evolutionary and Visual Framework for Clustering of DNA Microarray Data

José A. Castellanos-Garzón
  • Corresponding author
  • University of Valladolid, Department of Computer Science, Plaza Alto de los Leones, 1 - 40005 Segovia, Spain
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  • Other articles by this author:
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/ Fernando Díaz
  • University of Valladolid, Department of Computer Science, Plaza Alto de los Leones, 1 - 40005 Segovia, Spain
  • Other articles by this author:
  • De Gruyter OnlineGoogle Scholar
Published Online: 2016-10-18 | DOI: https://doi.org/10.1515/jib-2013-232

Summary

This paper presents a case study to show the competence of our evolutionary and visual framework for cluster analysis of DNA microarray data. The proposed framework joins a genetic algorithm for hierarchical clustering with a set of visual components of cluster tasks given by a tool. The cluster visualization tool allows us to display different views of clustering results as a means of cluster visual validation. The results of the genetic algorithm for clustering have shown that it can find better solutions than the other methods for the selected data set. Thus, this shows the reliability of the proposed framework.

About the article

Published Online: 2016-10-18

Published in Print: 2013-12-01


Citation Information: Journal of Integrative Bioinformatics, Volume 10, Issue 3, Pages 51–65, ISSN (Online) 1613-4516, DOI: https://doi.org/10.1515/jib-2013-232.

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© 2013 The Author(s). Published by Journal of Integrative Bioinformatics.. This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License. BY-NC-ND 4.0

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