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Journal of Integrative Bioinformatics

Editor-in-Chief: Schreiber, Falk / Hofestädt, Ralf

Managing Editor: Sommer, Björn

Ed. by Baumbach, Jan / Chen, Ming / Orlov, Yuriy / Allmer, Jens

Editorial Board: Giorgetti, Alejandro / Harrison, Andrew / Kochetov, Aleksey / Krüger, Jens / Ma, Qi / Matsuno, Hiroshi / Mitra, Chanchal K. / Pauling, Josch K. / Rawlings, Chris / Fdez-Riverola, Florentino / Romano, Paolo / Röttger, Richard / Shoshi, Alban / Soares, Siomar de Castro / Taubert, Jan / Tauch, Andreas / Yousef, Malik / Weise, Stephan / Hassani-Pak, Keywan


CiteScore 2017: 0.77

SCImago Journal Rank (SJR) 2017: 0.336

Open Access
Online
ISSN
1613-4516
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Volume 13, Issue 5

Issues

Differential Expression of Hyperhydricity Responsive Peach MicroRNAs

Ebru Diler
  • İzmir International Biomedicine and Genome Institute (iBG-izmir), Dokuz Eylül University, İnciraltı, 35340 İzmir, Turkey
  • Other articles by this author:
  • De Gruyter OnlineGoogle Scholar
/ Turgay Unver
  • İzmir International Biomedicine and Genome Institute (iBG-izmir), Dokuz Eylül University, İnciraltı, 35340 İzmir, Turkey
  • Other articles by this author:
  • De Gruyter OnlineGoogle Scholar
/ Gökhan Karakülah
  • Corresponding author
  • İzmir International Biomedicine and Genome Institute (iBG-izmir), Dokuz Eylül University, İnciraltı, 35340 İzmir, Turkey
  • Email
  • Other articles by this author:
  • De Gruyter OnlineGoogle Scholar
Published Online: 2017-04-20 | DOI: https://doi.org/10.1515/jib-2016-308

Summary

Hyperhydricity is a syndrome that causes morpho-physiological malformations in tissue culture plantlets. Micro-RNAs (miRNA) are small non-coding RNAs that play important regulatory roles in plant development, stress response, and adaptation to environmental conditions. In this study, differential expression analysis indicated that miRNAs play an underlying role in the responses to the hyperhydricity syndrome in peach Prunus persica (L.) leaves. 24 known and three novel potential miRNAs were characterized in hyperhydric and non-hyperhydric transcriptome libraries. The miRNA-target transcript analyses indicated that transport, plant cuticle development, intracellular part, and stress response are regulated by miRNAs in hyperhydric leaves. It is also suggested that miR5021 and miRnovel2 might play critical regulatory roles in hyperhydricity regarding miRNA-based response to stress. This study went one step further to advance understanding of molecular miRNA-based regulatory mechanisms regarding responses to hyperhydricity in peach.

About the article

Published Online: 2017-04-20

Published in Print: 2016-12-01


Citation Information: Journal of Integrative Bioinformatics, Volume 13, Issue 5, Pages 57–69, ISSN (Online) 1613-4516, DOI: https://doi.org/10.1515/jib-2016-308.

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© 2016 The Author(s). Published by Journal of Integrative Bioinformatics.. This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License. BY-NC-ND 4.0

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